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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826882.1_cds_XP_016502859.1_16454
CDS Infomation

[gene=LOC107820995] [db_xref=GeneID:107820995] [protein=probable serine/threonine-protein kinase At1g54610 isoform X2] [protein_id=XP_016502859.1] [location=complement(join(14395..14751,15121..15247,15321..15421,15785..16012,17750..18034,18467..18751))] [gbkey=CDS]
Sequence

ATGGGATGTGTTCTTGGAAAAATAGCTGCCGCAAAATTCCGCCGGGGAACCAAGAATTCG
AATGCTTCCGATGGTGTTGGGGTTCCGGAGGTTGATGCCAAGATCACTCAACCTCCACCG
ACGGCGCCGGCGCCGTCAGTGCCGGAGTATTACAGTCATAGAATATCAGGAAACTCGTTC
ACGATGAATCAGCAAGGGTGGCCGGCGTGGCTTGTTGCCGTCGCCGGAGATGCCATAAAA
GACTGGACTCCCCGCCGAGCTAATACCTTCGAGAAACTCGATAAGATTGGGCAAGGCACA
TATAGCAATGTATATAAAGCAAGGGACTTGATAACAGGGAAGATAGTTGCATTGAAGAAA
GTTAGGTTTGATACATTGGAGCCTGAGAGTGTGAAGTTCATGGCAAGAGAAATACTTGTT
TTGAAAAAACTGAACCATCCCAATGTCATCAAACTTGAAGGTTTGGTTACTTCAAGAATG
TCTTCTAGTCTTTACCTTGTTTTTGAGTACATGGAGCACGATCTCGCTGGCCTAGCTGCT
GTTCAAAAAGTCAAATTCACTGAACCACAGGTTGAGCAACTCCACAAAATATTTAAGTTG
TGTGGCTCTCCATCCGACGAATATTGGAAGAAATTCAAGTTACCAAATGCTACTCTTTTT
AAACCACAGCAACCTTATAAACGCTGCATTGCCGACACATTCAAGGATTTTCCACCCTCT
TCACATCCTCTGATTGAAAAACTTCTTGCTATTGATCCTGATGAAAGAGGCACAGCAACT
GCAGCTTTGAACAGCGAATTTTTTGCAACGGAGCCATATCCTTGTGAGCCTTCAAGTTTG
CCAAAGTATCCTCCTAGCAAGGAAATGGATGTAAAACTGAGAGACGAAGCAGCCAGGAGG
CAAAGAGGTTTGCACGGAAAAGCTCAAGCTGTTGTCGATGGCACCAGGAAAGTGAGAATT
CGTGAGAGAGTTAGCCGTGCAATTCCAGCTCCAGAGGCAAATGCAGAACTCCAACCAAAC
TTAGATAGGTGGAGAGTGATGACACAGGCCAATGCTAAGAGTAAAAGCGAGAAATTTCCC
CCGCCACATCAAGATGGAGCAGTCGGATACCCTCTTGATGCATCACACAACGGTCCTGTA
TCATTCAGTGTAGCTGATGCTTCTTTTACTTCATCAAATTTTGATCCAAAATCACGATCT
TTGAGAAGTACAACAACTACAGCTGGGACGTCGAGGCAGAGGAGAAATAAGAAAGAAGAG
CCTCATATGGCTCCTTCACGTAAGCTTATCCATGCATTCCTTCCATCTTCTGTTAGGCTA
TCTATAGATATGAGACTGAGGGGTAGAGCTTCTGTTTCGGAGACATTTAGTCACCATAGA
TAA

Peptide Sequence

PEP ID

XP_016502859.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X2 [Nicotiana tabacum]
Sequence

MGCVLGKIAAAKFRRGTKNSNASDGVGVPEVDAKITQPPPTAPAPSVPEYYSHRISGNSF
TMNQQGWPAWLVAVAGDAIKDWTPRRANTFEKLDKIGQGTYSNVYKARDLITGKIVALKK
VRFDTLEPESVKFMAREILVLKKLNHPNVIKLEGLVTSRMSSSLYLVFEYMEHDLAGLAA
VQKVKFTEPQVEQLHKIFKLCGSPSDEYWKKFKLPNATLFKPQQPYKRCIADTFKDFPPS
SHPLIEKLLAIDPDERGTATAALNSEFFATEPYPCEPSSLPKYPPSKEMDVKLRDEAARR
QRGLHGKAQAVVDGTRKVRIRERVSRAIPAPEANAELQPNLDRWRVMTQANAKSKSEKFP
PPHQDGAVGYPLDASHNGPVSFSVADASFTSSNFDPKSRSLRSTTTTAGTSRQRRNKKEE
PHMAPSRKLIHAFLPSSVRLSIDMRLRGRASVSETFSHHR

Transcript Sequence

Gene sequence data has not been registered.